test: Implement pidigits and reverse-complement
This commit is contained in:
Patrick Walton
parent
bc0dd7f108
commit
7720c15ae1
176
src/test/bench/shootout-pidigits.rs
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176
src/test/bench/shootout-pidigits.rs
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@ -0,0 +1,176 @@
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use core::cast::transmute;
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use core::from_str::FromStr;
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use core::libc::{STDOUT_FILENO, c_char, c_int, c_uint, c_void, fdopen, fputc};
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use core::libc::{fputs};
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use core::ptr::null;
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struct mpz_t {
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_mp_alloc: c_int,
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_mp_size: c_int,
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_mp_limb_t: *c_void,
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}
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impl mpz_t {
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fn new() -> mpz_t {
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mpz_t {
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_mp_alloc: 0,
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_mp_size: 0,
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_mp_limb_t: null(),
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}
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}
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}
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#[link_args="-lgmp"]
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extern {
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#[fast_ffi]
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#[link_name="__gmpz_add"]
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fn mpz_add(x: *mpz_t, y: *mpz_t, z: *mpz_t);
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#[fast_ffi]
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#[link_name="__gmpz_cmp"]
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fn mpz_cmp(x: *mpz_t, y: *mpz_t) -> c_int;
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#[fast_ffi]
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#[link_name="__gmpz_fdiv_qr"]
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fn mpz_fdiv_qr(a: *mpz_t, b: *mpz_t, c: *mpz_t, d: *mpz_t);
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#[fast_ffi]
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#[link_name="__gmpz_get_ui"]
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fn mpz_get_ui(x: *mpz_t) -> c_uint;
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#[fast_ffi]
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#[link_name="__gmpz_init"]
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fn mpz_init(x: *mpz_t);
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#[fast_ffi]
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#[link_name="__gmpz_init_set_ui"]
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fn mpz_init_set_ui(x: *mpz_t, y: c_uint);
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#[fast_ffi]
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#[link_name="__gmpz_mul_2exp"]
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fn mpz_mul_2exp(x: *mpz_t, y: *mpz_t, z: c_uint);
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#[fast_ffi]
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#[link_name="__gmpz_mul_ui"]
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fn mpz_mul_ui(x: *mpz_t, y: *mpz_t, z: c_uint);
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#[fast_ffi]
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#[link_name="__gmpz_submul_ui"]
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fn mpz_submul_ui(x: *mpz_t, y: *mpz_t, z: c_uint);
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}
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struct Context {
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numer: mpz_t,
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accum: mpz_t,
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denom: mpz_t,
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tmp1: mpz_t,
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tmp2: mpz_t,
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}
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impl Context {
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fn new() -> Context {
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unsafe {
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let mut result = Context {
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numer: mpz_t::new(),
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accum: mpz_t::new(),
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denom: mpz_t::new(),
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tmp1: mpz_t::new(),
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tmp2: mpz_t::new(),
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};
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mpz_init(&result.tmp1);
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mpz_init(&result.tmp2);
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mpz_init_set_ui(&result.numer, 1);
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mpz_init_set_ui(&result.accum, 0);
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mpz_init_set_ui(&result.denom, 1);
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result
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}
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}
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fn extract_digit(&mut self) -> i32 {
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unsafe {
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if mpz_cmp(&self.numer, &self.accum) > 0 {
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return -1;
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}
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// Compute (numer * 3 + accum) / denom
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mpz_mul_2exp(&self.tmp1, &self.numer, 1);
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mpz_add(&self.tmp1, &self.tmp1, &self.numer);
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mpz_add(&self.tmp1, &self.tmp1, &self.accum);
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mpz_fdiv_qr(&self.tmp1, &self.tmp2, &self.tmp1, &self.denom);
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// Now, if (numer * 4 + accum) % denom...
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mpz_add(&self.tmp2, &self.tmp2, &self.numer);
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// ... is normalized, then the two divisions have the same result.
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if mpz_cmp(&self.tmp2, &self.denom) >= 0 {
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return -1;
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}
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mpz_get_ui(&self.tmp1) as i32
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}
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}
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fn next_term(&mut self, k: u32) {
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unsafe {
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let y2 = k*2 + 1;
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mpz_mul_2exp(&self.tmp1, &self.numer, 1);
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mpz_add(&self.accum, &self.accum, &self.tmp1);
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mpz_mul_ui(&self.accum, &self.accum, y2);
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mpz_mul_ui(&self.numer, &self.numer, k);
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mpz_mul_ui(&self.denom, &self.denom, y2);
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}
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}
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fn eliminate_digit(&mut self, d: u32) {
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unsafe {
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mpz_submul_ui(&self.accum, &self.denom, d);
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mpz_mul_ui(&self.accum, &self.accum, 10);
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mpz_mul_ui(&self.numer, &self.numer, 10);
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}
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}
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}
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fn pidigits(n: u32) {
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unsafe {
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let mode = "w";
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let stdout = fdopen(STDOUT_FILENO as c_int, transmute(&mode[0]));
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let mut d: i32;
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let mut i: u32 = 0, k: u32 = 0, m: u32;
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let mut context = Context::new();
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loop {
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loop {
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k += 1;
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context.next_term(k);
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d = context.extract_digit();
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if d != -1 {
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break;
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}
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}
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fputc((d as c_int) + ('0' as c_int), stdout);
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i += 1;
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m = i % 10;
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if m == 0 {
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let res = fmt!("\t:%d\n", i as int);
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fputs(transmute(&res[0]), stdout);
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}
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if i >= n {
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break;
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}
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context.eliminate_digit(d as u32);
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}
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if m != 0 {
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m = 10 - m;
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while m != 0 {
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m -= 1;
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fputc(' ' as c_int, stdout);
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}
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let res = fmt!("\t:%d\n", i as int);
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fputs(transmute(&res[0]), stdout);
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}
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}
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}
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#[fixed_stack_segment]
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fn main() {
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let n: u32 = FromStr::from_str(os::args()[1]).get();
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pidigits(n);
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}
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152
src/test/bench/shootout-reverse-complement.rs
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152
src/test/bench/shootout-reverse-complement.rs
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@ -0,0 +1,152 @@
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use core::cast::transmute;
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use core::libc::{STDOUT_FILENO, c_int, fdopen, fgets, fopen, fputc, fwrite};
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use core::libc::{size_t};
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use core::ptr::null;
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use core::vec::{capacity, reserve, reserve_at_least};
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use core::vec::raw::set_len;
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static LINE_LEN: u32 = 80;
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static COMPLEMENTS: [u8, ..256] = [
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0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
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0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
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0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
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0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
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0,
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'T' as u8,
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'V' as u8,
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'G' as u8,
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'H' as u8,
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0,
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0,
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'C' as u8,
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'D' as u8,
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0,
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0,
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'M' as u8,
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0,
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'K' as u8,
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'N' as u8,
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0,
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0,
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0,
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'Y' as u8,
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'S' as u8,
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'A' as u8,
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'A' as u8,
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'B' as u8,
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'W' as u8,
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0,
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'R' as u8,
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0,
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0,
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0,
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0,
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0,
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0,
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0,
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'T' as u8,
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'V' as u8,
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'G' as u8,
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'H' as u8,
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0,
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0,
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'C' as u8,
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'D' as u8,
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0,
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0,
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'M' as u8,
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0,
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'K' as u8,
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'N' as u8,
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0,
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0,
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0,
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'Y' as u8,
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'S' as u8,
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'A' as u8,
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'A' as u8,
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'B' as u8,
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'W' as u8,
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0,
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'R' as u8,
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0,
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0,
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0,
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0,
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0,
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0,
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0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
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0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
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0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
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0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
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0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
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0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
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0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
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0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
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];
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#[fixed_stack_segment]
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fn main() {
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unsafe {
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let mode = "r";
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//let stdin = fdopen(STDIN_FILENO as c_int, transmute(&mode[0]));
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let path = "reversecomplement-input.txt";
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let stdin = fopen(transmute(&path[0]), transmute(&mode[0]));
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let mode = "w";
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let stdout = fdopen(STDOUT_FILENO as c_int, transmute(&mode[0]));
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let mut out: ~[u8] = ~[];
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reserve(&mut out, 12777888);
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let mut pos = 0;
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loop {
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let needed = pos + (LINE_LEN as uint) + 1;
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if capacity(&out) < needed {
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reserve_at_least(&mut out, needed);
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}
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let mut ptr = out.unsafe_mut_ref(pos);
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if fgets(transmute(ptr), LINE_LEN as c_int, stdin) == null() {
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break;
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}
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// Don't change lines that begin with '>' or ';'.
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let first = *ptr;
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if first == ('>' as u8) {
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while *ptr != 0 {
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ptr = ptr.offset(1);
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}
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*ptr = '\n' as u8;
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pos = (ptr as uint) - (out.unsafe_ref(0) as uint);
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fwrite(transmute(out.unsafe_ref(0)),
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1,
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pos as size_t,
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stdout);
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pos = 0;
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loop;
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}
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// Complement other lines.
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loop {
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let ch = *ptr;
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if ch == 0 {
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break;
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}
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*ptr = COMPLEMENTS.unsafe_get(ch as uint);
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ptr = ptr.offset(1);
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}
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*ptr = '\n' as u8;
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pos = (ptr as uint) - (out.unsafe_ref(0) as uint);
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}
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fwrite(transmute(out.unsafe_ref(0)), 1, pos as size_t, stdout);
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}
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}
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